What can whole-transcriptome spatial imaging reveal that other approaches miss?


Discover how high-fidelity, high-sensitivity subcellular imaging of the whole transcriptome with proteomics on the CosMx® Spatial Molecular Imager (SMI) is enabling researchers to uncover complete pathway-level spatial insights and disease biology.

Join our featured computational biologists in a 2-part webinar as they detail how the CosMx SMI enables researchers to map cellular organization, characterize tumor microenvironments, and uncover disease-driving pathways with single-cell, subcellular resolution. Through discussions of the underlying technology, analytics strategies, and a real-world breast cancer application, you'll gain practical insights into generating and interpreting spatial multiomic data for translational research.


WEBINAR DETAILS


Talk 1: Unlock Deeper Biological Insights From CosMx Single-cell Whole Transcriptome Data With Fit-for-Purpose Analytics

In this session, we will dive into the underlying direct hybridization chemistry of the CosMx SMI and discover how it offers advantages over amplification-based technologies. Additionally, we will discuss why fit-for-purpose analytical methods are critical for analyzing CosMx data and outline the robust resources available to support your spatial whole-transcriptome and multiomic data analysis workflows, including the AtoMx® Spatial Informatics Platform and open-source pipelines.


Talk 2: Decoding Cancer Hallmarks through Subcellular Imaging of the Whole Transcriptome in Breast Cancer

This session demonstrates the power of spatial biological storytelling by mapping tumor heterogeneity and microenvironment dynamics. Using the CosMx Human Whole Transcriptome (WTX) Assay with the CosMx Human Immuno-Oncology Protein Assay applied directly to human breast cancer tissue, we will uncover how spatially resolved multiomic data reveals the intricate hallmarks of cancer. See firsthand how high-plex single-cell data allows researchers to dissect cellular neighborhoods, identify rare cell states, and decode the localized signaling pathways driving tumor evasion.

What you will learn from this webinar:

- Chemistry Advantage: How direct hybridization chemistry allows us to scale to the whole transcriptome and avoids the specific biases associated with amplification-based spatial methods.

- Best Analytical Practices: Why fit-for-purpose analytical approaches are essential to unlock the full potential of CosMx spatial datasets.

- Streamlined Informatics Workflows: How to leverage both the cloud-based AtoMx SIP and open-source tools to visualize and analyze whole-transcriptome and multiomic data.

- Translational Oncology Applications: Real-world insights into mapping the breast cancer tumor microenvironment to uncover spatial biology mechanisms and tumor heterogeneity at single-cell subcellular resolution.

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Speakers

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Felicia New, PhD
Staff Computational Biologist, Bruker Spatial Biology
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Claire Williams, PhD
Sr Computational Biologist, Bruker Spatial Biology
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About Speaker:
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Watch it on-demand

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Bonus Presentation: Whole transcriptome spatial molecular imaging in matched pre and post treatment specimens to identify therapeutic vulnerabilities and treatment-associated effects in pancreatic

Dr. Will Hwang shared his data at the most recent AACR event and we will re-air his presentation for you here.  This research highlights new strategies for analyzing whole-transcriptome spatial transcriptomics at subcellular resolution and the potential thereof to identify novel treatment-associated effects. You won’t want to miss it.

Presenter: Will Hwang, MD, PhD Assistant Professor, Harvard Medical School; Principal Investigator, Massachusetts General Hospital; Associate Faculty Member, Broad Institute of MIT and Harvard


Register Today! 

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